This documentation is incomplete and under development. If you would like to help, please open an issue or pull request at GitHub.
This is the documentation for
stdpopsim, the standard library for population
genetic simulation models.
stdpopsim to make it easier for you to run reproducible, bug-free
simulations of genetic datasets from published demographic histories.
Under the hood,
stdpopsim relies on
SLiM 3 to generate sample datasets in the
tree sequence format.
Are there other features, models or organisms that you’d like to see in
This software is maintained by the PopSim Consortium,
a global community of scientists and developers who are working together to improve
standards for benchmarking and testing in population genetics.
Read the Development page to find out how you can join us.
If you use
stdpopsim in your work, please cite us:
Add link to manuscript when it’s ready.